Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 KRT8P9-201ENST00000558927 1449 ntBASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 AC096633.1-201ENST00000422446 749 ntBASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 ECEL1P2-202ENST00000465689 757 ntBASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 AL136038.4-201ENST00000603606 1261 ntBASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.92■□□□□ 0.46
PHACTR1Q9C0D0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 MMP23A-201ENST00000234610 1017 ntBASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 TSPY12P-201ENST00000421279 868 ntBASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 AL391807.1-203ENST00000604392 2365 ntBASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PHACTR1Q9C0D0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 LINC02012-201ENST00000608206 1725 ntBASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHACTR1Q9C0D0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms