Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 AC074051.2-201ENST00000565115 352 ntBASIC15.82■□□□□ 0.12
USB1Q9BQ65 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
USB1Q9BQ65 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USB1Q9BQ65 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 AC010740.1-201ENST00000417035 684 ntBASIC15.81■□□□□ 0.12
USB1Q9BQ65 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 IGHV3-47-201ENST00000425060 335 ntBASIC15.81■□□□□ 0.12
USB1Q9BQ65 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 MINOS1P3-201ENST00000457048 203 ntBASIC15.81■□□□□ 0.12
USB1Q9BQ65 AC091917.2-201ENST00000505002 744 ntBASIC15.81■□□□□ 0.12
USB1Q9BQ65 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 ADAM3B-201ENST00000569937 840 ntBASIC15.81■□□□□ 0.12
USB1Q9BQ65 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.81■□□□□ 0.12
USB1Q9BQ65 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USB1Q9BQ65 AC018695.7-201ENST00000624587 2492 ntBASIC15.8■□□□□ 0.12
USB1Q9BQ65 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
USB1Q9BQ65 AL354751.1-201ENST00000412768 1863 ntBASIC15.8■□□□□ 0.12
USB1Q9BQ65 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USB1Q9BQ65 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms