Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 AC099398.1-201ENST00000567919 2776 ntBASIC17.67■□□□□ 0.42
CPNE1Q99829 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 AP003733.1-201ENST00000491725 852 ntBASIC17.67■□□□□ 0.42
CPNE1Q99829 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CPNE1Q99829 ZNF444P1-201ENST00000559497 298 ntBASIC17.67■□□□□ 0.42
CPNE1Q99829 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CPNE1Q99829 AC011558.1-201ENST00000623459 338 ntBASIC17.67■□□□□ 0.42
CPNE1Q99829 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPNE1Q99829 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE1Q99829 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE1Q99829 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE1Q99829 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE1Q99829 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE1Q99829 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CPNE1Q99829 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 AL353692.3-201ENST00000407031 1396 ntBASIC17.66■□□□□ 0.42
CPNE1Q99829 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE1Q99829 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 LINC01311-201ENST00000565162 1445 ntBASIC17.66■□□□□ 0.42
CPNE1Q99829 NKILA-202ENST00000614771 2598 ntBASIC17.66■□□□□ 0.42
CPNE1Q99829 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 MIR662-201ENST00000384847 95 ntBASIC17.66■□□□□ 0.42
CPNE1Q99829 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 BX664615.1-201ENST00000443558 458 ntBASIC17.66■□□□□ 0.42
CPNE1Q99829 MTCL1P1-201ENST00000446207 792 ntBASIC17.66■□□□□ 0.42
CPNE1Q99829 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE1Q99829 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE1Q99829 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.66■□□□□ 0.42
CPNE1Q99829 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE1Q99829 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE1Q99829 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.66■□□□□ 0.42
CPNE1Q99829 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE1Q99829 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE1Q99829 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE1Q99829 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CPNE1Q99829 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE1Q99829 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE1Q99829 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 AC068472.1-201ENST00000474589 881 ntBASIC17.65■□□□□ 0.42
CPNE1Q99829 AC092597.1-201ENST00000487352 616 ntBASIC17.65■□□□□ 0.42
CPNE1Q99829 YBX1P2-201ENST00000489612 999 ntBASIC17.65■□□□□ 0.42
CPNE1Q99829 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE1Q99829 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE1Q99829 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 GPR32P1-201ENST00000601788 811 ntBASIC17.65■□□□□ 0.42
CPNE1Q99829 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE1Q99829 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPNE1Q99829 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE1Q99829 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms