Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCA3Q99618 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCA3Q99618 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 AC026120.1-201ENST00000611536 926 ntBASIC18.25■□□□□ 0.51
CDCA3Q99618 ACTL9-202ENST00000612068 1252 ntBASIC18.25■□□□□ 0.51
CDCA3Q99618 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 AC009949.1-201ENST00000623048 1830 ntBASIC18.25■□□□□ 0.51
CDCA3Q99618 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCA3Q99618 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.24■□□□□ 0.51
CDCA3Q99618 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 TIMM8BP1-201ENST00000452384 211 ntBASIC18.24■□□□□ 0.51
CDCA3Q99618 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.24■□□□□ 0.51
CDCA3Q99618 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CDCA3Q99618 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA3Q99618 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDCA3Q99618 AC129492.6-201ENST00000611383 1305 ntBASIC18.23■□□□□ 0.51
CDCA3Q99618 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 AC092919.2-201ENST00000623631 1645 ntBASIC18.23■□□□□ 0.51
CDCA3Q99618 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCA3Q99618 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCA3Q99618 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.23■□□□□ 0.51
CDCA3Q99618 CNN2P2-201ENST00000443536 909 ntBASIC18.23■□□□□ 0.51
CDCA3Q99618 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCA3Q99618 CNN2P3-201ENST00000450201 906 ntBASIC18.23■□□□□ 0.51
CDCA3Q99618 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.23■□□□□ 0.51
CDCA3Q99618 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDCA3Q99618 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.23■□□□□ 0.51
CDCA3Q99618 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCA3Q99618 AL136317.3-201ENST00000618497 906 ntBASIC18.23■□□□□ 0.51
CDCA3Q99618 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CDCA3Q99618 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CDCA3Q99618 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCA3Q99618 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.22■□□□□ 0.51
CDCA3Q99618 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.22■□□□□ 0.51
CDCA3Q99618 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDCA3Q99618 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDCA3Q99618 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 AL355306.1-201ENST00000415580 579 ntBASIC18.22■□□□□ 0.51
CDCA3Q99618 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCA3Q99618 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.22■□□□□ 0.51
CDCA3Q99618 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.22■□□□□ 0.51
CDCA3Q99618 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.22■□□□□ 0.51
CDCA3Q99618 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 AC069262.1-201ENST00000539058 672 ntBASIC18.22■□□□□ 0.51
CDCA3Q99618 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.22■□□□□ 0.51
CDCA3Q99618 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms