Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 AP005901.3-202ENST00000581653 237 ntBASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 AL139327.4-201ENST00000612362 153 ntBASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 AC116407.4-201ENST00000623319 1061 ntBASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB18PQ96TA0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB18PQ96TA0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
PCDHB18PQ96TA0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.71■□□□□ 0.58
PCDHB18PQ96TA0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 AC009053.2-201ENST00000563701 2365 ntBASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB18PQ96TA0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms