Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC007389.4-201ENST00000454674 793 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 CXCL1P1-201ENST00000502804 216 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ZNF890P-202ENST00000530367 1156 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC116165.1-201ENST00000611806 668 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 FEM1AP3-201ENST00000403722 1741 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 WASH4P-201ENST00000564273 1246 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC145423.3-201ENST00000615987 467 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 MIR1247-201ENST00000408206 136 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CDC14C-201ENST00000428251 1719 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AL662890.1-201ENST00000396818 632 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 IRX1P1-201ENST00000438849 1838 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 RN7SL720P-201ENST00000488178 304 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 MIR8072-201ENST00000614241 80 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 GUSBP5-202ENST00000510805 1989 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms