Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 BCAR1-209ENST00000546196 1340 ntBASIC18.74■□□□□ 0.59
CASD1Q96PB1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.73■□□□□ 0.59
CASD1Q96PB1 METTL21AP1-201ENST00000438852 635 ntBASIC18.73■□□□□ 0.59
CASD1Q96PB1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CASD1Q96PB1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 AL590787.1-201ENST00000568856 1315 ntBASIC18.73■□□□□ 0.59
CASD1Q96PB1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASD1Q96PB1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 CEND1P1-201ENST00000451006 455 ntBASIC18.72■□□□□ 0.59
CASD1Q96PB1 AL031432.2-201ENST00000566714 459 ntBASIC18.72■□□□□ 0.59
CASD1Q96PB1 AL928711.1-201ENST00000570165 459 ntBASIC18.72■□□□□ 0.59
CASD1Q96PB1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.72■□□□□ 0.59
CASD1Q96PB1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASD1Q96PB1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 FLJ13224-201ENST00000313737 1514 ntBASIC18.71■□□□□ 0.59
CASD1Q96PB1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 CNN2P11-201ENST00000429351 262 ntBASIC18.71■□□□□ 0.59
CASD1Q96PB1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 AC025580.3-201ENST00000617932 1424 ntBASIC18.71■□□□□ 0.59
CASD1Q96PB1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 PI4KAP1-204ENST00000612579 1703 ntBASIC18.71■□□□□ 0.59
CASD1Q96PB1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CASD1Q96PB1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASD1Q96PB1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms