Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 OR7E47P-204ENST00000575924 449 ntBASIC19.04■□□□□ 0.64
LRCH3Q96II8 AD001527.2-201ENST00000622994 785 ntBASIC19.04■□□□□ 0.64
LRCH3Q96II8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 GPR53P-205ENST00000457298 1084 ntBASIC19.03■□□□□ 0.64
LRCH3Q96II8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 AC112698.1-201ENST00000510299 916 ntBASIC19.03■□□□□ 0.64
LRCH3Q96II8 AC116407.2-201ENST00000613639 860 ntBASIC19.03■□□□□ 0.64
LRCH3Q96II8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 AC092919.2-201ENST00000623631 1645 ntBASIC19.03■□□□□ 0.64
LRCH3Q96II8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
LRCH3Q96II8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.03■□□□□ 0.64
LRCH3Q96II8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH3Q96II8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 ADH5P3-201ENST00000433842 1137 ntBASIC19.02■□□□□ 0.64
LRCH3Q96II8 AC005237.2-201ENST00000434368 219 ntBASIC19.02■□□□□ 0.64
LRCH3Q96II8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 AC125807.1-201ENST00000483097 614 ntBASIC19.02■□□□□ 0.64
LRCH3Q96II8 SERBP1P5-201ENST00000510079 1181 ntBASIC19.02■□□□□ 0.64
LRCH3Q96II8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH3Q96II8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 AL024508.2-201ENST00000607749 1894 ntBASIC19.02■□□□□ 0.64
LRCH3Q96II8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH3Q96II8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH3Q96II8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH3Q96II8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH3Q96II8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LRCH3Q96II8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH3Q96II8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH3Q96II8 AC093503.3-201ENST00000624917 2352 ntBASIC19.01■□□□□ 0.63
LRCH3Q96II8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 AL512638.1-201ENST00000457493 794 ntBASIC19.01■□□□□ 0.63
LRCH3Q96II8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms