Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 SART3-203ENST00000546611 1184 ntBASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 AC073592.4-201ENST00000623827 446 ntBASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 AC132938.5-201ENST00000624980 1813 ntBASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 AC008764.6-201ENST00000595909 2069 ntBASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 SIGLEC16-201ENST00000599858 1437 ntBASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCD1Q96GM5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCD1Q96GM5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MRPL3P1-201ENST00000400109 1033 ntBASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 STK25P1-201ENST00000585406 838 ntBASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 NKAPP1-205ENST00000585790 367 ntBASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 AL773604.1-201ENST00000617417 272 ntBASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 LINC01451-201ENST00000623792 534 ntBASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCD1Q96GM5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 AL020989.1-201ENST00000422979 469 ntBASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 AC018712.1-201ENST00000455767 687 ntBASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 RNPS1P1-201ENST00000507437 918 ntBASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 AC021087.4-201ENST00000563761 564 ntBASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms