Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 AC093028.1-201ENST00000622998 982 ntBASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 AL020996.1-203ENST00000536896 2307 ntBASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRNP40Q96DI7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 PTCHD3P3-201ENST00000403073 906 ntBASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 TSEN15P1-201ENST00000423257 515 ntBASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 FAM58CP-201ENST00000435741 640 ntBASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 ACTG1P14-201ENST00000446382 1122 ntBASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 AP000344.2-201ENST00000512987 629 ntBASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 AC018445.3-201ENST00000624177 1945 ntBASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.81■□□□□ 0.12
SNRNP40Q96DI7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AC025580.3-201ENST00000617932 1424 ntBASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms