Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 KRT89P-201ENST00000620027 1478 ntBASIC18.63■□□□□ 0.57
RNF25Q96BH1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 NKILA-202ENST00000614771 2598 ntBASIC18.62■□□□□ 0.57
RNF25Q96BH1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 HLA-F-220ENST00000434407 884 ntBASIC18.62■□□□□ 0.57
RNF25Q96BH1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 KRT18P65-201ENST00000439811 1286 ntBASIC18.62■□□□□ 0.57
RNF25Q96BH1 KRT18P57-201ENST00000443599 1254 ntBASIC18.62■□□□□ 0.57
RNF25Q96BH1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF25Q96BH1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF25Q96BH1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AC133963.1-201ENST00000504166 1679 ntBASIC18.61■□□□□ 0.57
RNF25Q96BH1 AL023806.1-201ENST00000603994 1649 ntBASIC18.61■□□□□ 0.57
RNF25Q96BH1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 KRT8P47-201ENST00000604727 1398 ntBASIC18.61■□□□□ 0.57
RNF25Q96BH1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 AC011676.5-201ENST00000624864 2660 ntBASIC18.61■□□□□ 0.57
RNF25Q96BH1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF25Q96BH1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF25Q96BH1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF25Q96BH1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF25Q96BH1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF25Q96BH1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF25Q96BH1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF25Q96BH1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF25Q96BH1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF25Q96BH1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms