Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL773604.1-201ENST00000617417 272 ntBASIC18.63■□□□□ 0.57
ATP2A3Q93084 TP73-AS1-207ENST00000624167 988 ntBASIC18.63■□□□□ 0.57
ATP2A3Q93084 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 TP73-AS1-210ENST00000637775 1455 ntBASIC18.63■□□□□ 0.57
ATP2A3Q93084 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 MTCL1P1-201ENST00000446207 792 ntBASIC18.62■□□□□ 0.57
ATP2A3Q93084 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 FAM197Y8-203ENST00000450145 560 ntBASIC18.62■□□□□ 0.57
ATP2A3Q93084 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 AP001005.1-201ENST00000571755 1248 ntBASIC18.62■□□□□ 0.57
ATP2A3Q93084 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 AC008608.2-201ENST00000606089 416 ntBASIC18.62■□□□□ 0.57
ATP2A3Q93084 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 LINC00602-201ENST00000629776 2065 ntBASIC18.62■□□□□ 0.57
ATP2A3Q93084 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2A3Q93084 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A3Q93084 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 LTB4R2-202ENST00000528054 3092 ntBASIC18.61■□□□□ 0.57
ATP2A3Q93084 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 RCN1P2-201ENST00000398357 915 ntBASIC18.61■□□□□ 0.57
ATP2A3Q93084 AC132008.2-207ENST00000454517 770 ntBASIC18.61■□□□□ 0.57
ATP2A3Q93084 AF186996.4-201ENST00000467186 377 ntBASIC18.61■□□□□ 0.57
ATP2A3Q93084 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 AC120114.3-201ENST00000611923 658 ntBASIC18.61■□□□□ 0.57
ATP2A3Q93084 BX640515.1-201ENST00000617215 977 ntBASIC18.61■□□□□ 0.57
ATP2A3Q93084 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A3Q93084 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A3Q93084 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms