Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP6NLQ92738 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP6NLQ92738 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP6NLQ92738 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP6NLQ92738 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP6NLQ92738 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.9■□□□□ 0.78
USP6NLQ92738 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.9■□□□□ 0.78
USP6NLQ92738 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.9■□□□□ 0.78
USP6NLQ92738 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
USP6NLQ92738 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.9■□□□□ 0.78
USP6NLQ92738 FAM58CP-201ENST00000435741 640 ntBASIC19.9■□□□□ 0.78
USP6NLQ92738 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP6NLQ92738 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.9■□□□□ 0.78
USP6NLQ92738 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP6NLQ92738 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.9■□□□□ 0.78
USP6NLQ92738 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USP6NLQ92738 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.9■□□□□ 0.78
USP6NLQ92738 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
USP6NLQ92738 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.9■□□□□ 0.78
USP6NLQ92738 AL513210.1-201ENST00000629608 234 ntBASIC19.9■□□□□ 0.78
USP6NLQ92738 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP6NLQ92738 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP6NLQ92738 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP6NLQ92738 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP6NLQ92738 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 AL035633.1-201ENST00000406139 838 ntBASIC19.89■□□□□ 0.77
USP6NLQ92738 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.89■□□□□ 0.77
USP6NLQ92738 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.89■□□□□ 0.77
USP6NLQ92738 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.89■□□□□ 0.77
USP6NLQ92738 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.89■□□□□ 0.77
USP6NLQ92738 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.89■□□□□ 0.77
USP6NLQ92738 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USP6NLQ92738 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.89■□□□□ 0.77
USP6NLQ92738 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.89■□□□□ 0.77
USP6NLQ92738 AC092902.6-201ENST00000641783 218 ntBASIC19.89■□□□□ 0.77
USP6NLQ92738 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6NLQ92738 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6NLQ92738 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.88■□□□□ 0.77
USP6NLQ92738 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6NLQ92738 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
USP6NLQ92738 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.88■□□□□ 0.77
USP6NLQ92738 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.88■□□□□ 0.77
USP6NLQ92738 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6NLQ92738 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.88■□□□□ 0.77
USP6NLQ92738 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6NLQ92738 AC091812.2-201ENST00000619081 385 ntBASIC19.88■□□□□ 0.77
USP6NLQ92738 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6NLQ92738 AC097637.2-201ENST00000624096 1997 ntBASIC19.88■□□□□ 0.77
USP6NLQ92738 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
USP6NLQ92738 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6NLQ92738 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6NLQ92738 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USP6NLQ92738 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
USP6NLQ92738 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
USP6NLQ92738 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.87■□□□□ 0.77
USP6NLQ92738 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.87■□□□□ 0.77
USP6NLQ92738 LINC00982-205ENST00000420957 435 ntBASIC19.87■□□□□ 0.77
USP6NLQ92738 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.87■□□□□ 0.77
USP6NLQ92738 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.87■□□□□ 0.77
USP6NLQ92738 STK19B-204ENST00000512515 211 ntBASIC19.87■□□□□ 0.77
USP6NLQ92738 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.87■□□□□ 0.77
USP6NLQ92738 AC011467.4-201ENST00000594891 528 ntBASIC19.87■□□□□ 0.77
USP6NLQ92738 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6NLQ92738 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms