Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 AC084018.2-201ENST00000613093 2607 ntBASIC13.97□□□□□ -0.17
NPIPB3Q92617 REXO1L11P-201ENST00000620964 1927 ntBASIC13.97□□□□□ -0.17
NPIPB3Q92617 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
NPIPB3Q92617 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB3Q92617 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 ECEL1P3-201ENST00000427961 737 ntBASIC13.96□□□□□ -0.17
NPIPB3Q92617 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 AC024563.2-201ENST00000603282 481 ntBASIC13.96□□□□□ -0.17
NPIPB3Q92617 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPB3Q92617 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPB3Q92617 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.96□□□□□ -0.18
NPIPB3Q92617 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.18
NPIPB3Q92617 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPB3Q92617 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.96□□□□□ -0.18
NPIPB3Q92617 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPB3Q92617 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB3Q92617 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPB3Q92617 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB3Q92617 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB3Q92617 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPB3Q92617 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPB3Q92617 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB3Q92617 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB3Q92617 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB3Q92617 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB3Q92617 KRT18P65-201ENST00000439811 1286 ntBASIC13.95□□□□□ -0.18
NPIPB3Q92617 DDX43P3-201ENST00000441064 443 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms