Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP3S1Q92572 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP3S1Q92572 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.6■□□□□ 0.09
AP3S1Q92572 TSPY26P-202ENST00000565928 3884 ntBASIC15.6■□□□□ 0.09
AP3S1Q92572 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.6■□□□□ 0.09
AP3S1Q92572 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
AP3S1Q92572 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP3S1Q92572 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.6■□□□□ 0.09
AP3S1Q92572 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 AC004951.3-201ENST00000418645 1148 ntBASIC15.59■□□□□ 0.09
AP3S1Q92572 AC004980.1-204ENST00000429707 299 ntBASIC15.59■□□□□ 0.09
AP3S1Q92572 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.59■□□□□ 0.09
AP3S1Q92572 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.59■□□□□ 0.09
AP3S1Q92572 AC005915.1-201ENST00000624912 2018 ntBASIC15.59■□□□□ 0.09
AP3S1Q92572 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
AP3S1Q92572 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.59■□□□□ 0.09
AP3S1Q92572 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP3S1Q92572 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.58■□□□□ 0.09
AP3S1Q92572 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3S1Q92572 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.09
AP3S1Q92572 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP3S1Q92572 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3S1Q92572 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
AP3S1Q92572 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3S1Q92572 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
AP3S1Q92572 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP3S1Q92572 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
AP3S1Q92572 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 AC022188.1-201ENST00000620960 1664 ntBASIC15.58■□□□□ 0.08
AP3S1Q92572 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP3S1Q92572 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.58■□□□□ 0.08
AP3S1Q92572 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3S1Q92572 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3S1Q92572 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
AP3S1Q92572 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.58■□□□□ 0.08
AP3S1Q92572 AL050303.2-201ENST00000619798 666 ntBASIC15.58■□□□□ 0.08
AP3S1Q92572 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.58■□□□□ 0.08
AP3S1Q92572 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
AP3S1Q92572 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
AP3S1Q92572 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.58■□□□□ 0.08
AP3S1Q92572 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
AP3S1Q92572 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 CYP2T1P-202ENST00000641596 2535 ntBASIC15.58■□□□□ 0.08
AP3S1Q92572 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3S1Q92572 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
AP3S1Q92572 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3S1Q92572 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3S1Q92572 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3S1Q92572 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.58■□□□□ 0.08
AP3S1Q92572 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3S1Q92572 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3S1Q92572 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP3S1Q92572 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms