Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 AP002472.1-201ENST00000577490 586 ntBASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 AC025580.3-201ENST00000617932 1424 ntBASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RAPGEF4Q8WZA2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RAPGEF4Q8WZA2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
RAPGEF4Q8WZA2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF4Q8WZA2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AL020996.1-203ENST00000536896 2307 ntBASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 REXO1L9P-201ENST00000604264 2108 ntBASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 PI4KAP1-204ENST00000612579 1703 ntBASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AL645939.2-201ENST00000427340 991 ntBASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 FAM58CP-201ENST00000435741 640 ntBASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AC074386.1-202ENST00000463561 864 ntBASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF4Q8WZA2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms