Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 AC116407.4-201ENST00000623319 1061 ntBASIC17.28■□□□□ 0.36
ATL1Q8WXF7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATL1Q8WXF7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 AL139384.1-201ENST00000612143 3047 ntBASIC17.27■□□□□ 0.36
ATL1Q8WXF7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 PCED1CP-201ENST00000419887 785 ntBASIC17.27■□□□□ 0.36
ATL1Q8WXF7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.27■□□□□ 0.36
ATL1Q8WXF7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 AL353801.3-201ENST00000609898 542 ntBASIC17.27■□□□□ 0.36
ATL1Q8WXF7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 AL355312.1-201ENST00000407115 2176 ntBASIC17.27■□□□□ 0.36
ATL1Q8WXF7 HLA-J-201ENST00000462773 1622 ntBASIC17.27■□□□□ 0.36
ATL1Q8WXF7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATL1Q8WXF7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.27■□□□□ 0.35
ATL1Q8WXF7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 AC246785.2-201ENST00000432512 513 ntBASIC17.26■□□□□ 0.35
ATL1Q8WXF7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 IER3-202ENST00000376377 1350 ntBASIC17.26■□□□□ 0.35
ATL1Q8WXF7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATL1Q8WXF7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 LINC00304-203ENST00000565008 1864 ntBASIC17.25■□□□□ 0.35
ATL1Q8WXF7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATL1Q8WXF7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms