Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 ELL2P1-201ENST00000413990 1906 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AP002414.1-201ENST00000391405 1147 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 LINC00982-205ENST00000420957 435 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 CEND1P1-201ENST00000451006 455 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AC096734.2-201ENST00000562054 433 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AL353135.1-201ENST00000606729 504 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AC004877.2-201ENST00000623941 599 ntBASIC13.68□□□□□ -0.22
LINC01006Q8NI28 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC01006Q8NI28 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 MYCLP1-201ENST00000372451 1075 ntBASIC13.67□□□□□ -0.22
LINC01006Q8NI28 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CNN2P11-201ENST00000429351 262 ntBASIC13.67□□□□□ -0.22
LINC01006Q8NI28 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 AC002558.1-201ENST00000488906 803 ntBASIC13.67□□□□□ -0.22
LINC01006Q8NI28 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 PDPK2P-202ENST00000562415 1191 ntBASIC13.67□□□□□ -0.22
LINC01006Q8NI28 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 AC010507.1-201ENST00000633895 436 ntBASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01006Q8NI28 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 BCAR1-209ENST00000546196 1340 ntBASIC13.66□□□□□ -0.22
LINC01006Q8NI28 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms