Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BBS1Q8NFJ9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 DDX43P3-201ENST00000441064 443 ntBASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 AC128688.1-201ENST00000487626 519 ntBASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 AGGF1P2-201ENST00000426656 2106 ntBASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BBS1Q8NFJ9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 AC113404.2-201ENST00000507884 177 ntBASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 NEK4P2-201ENST00000580004 1012 ntBASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS1Q8NFJ9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms