Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC155Q8N6L0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC155Q8N6L0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC155Q8N6L0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC155Q8N6L0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC155Q8N6L0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC155Q8N6L0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC155Q8N6L0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 AC008764.6-201ENST00000595909 2069 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 ZNF259P1-201ENST00000407656 1365 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 FGFR3P6-201ENST00000457012 610 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 AC005336.2-201ENST00000593183 939 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 MTDHP3-201ENST00000594186 672 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 AC009154.2-201ENST00000621177 724 ntBASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC155Q8N6L0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 AC243591.1-201ENST00000452967 1364 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 AC068472.1-201ENST00000474589 881 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 AC092865.5-201ENST00000545435 363 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 TERC-201ENST00000602385 541 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 MIR7706-201ENST00000613747 67 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 FZD10-202ENST00000539839 3282 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms