Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.42■□□□□ 0.7
NME8Q8N427 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
NME8Q8N427 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.42■□□□□ 0.7
NME8Q8N427 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.42■□□□□ 0.7
NME8Q8N427 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.42■□□□□ 0.7
NME8Q8N427 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.42■□□□□ 0.7
NME8Q8N427 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.42■□□□□ 0.7
NME8Q8N427 AL356488.2-201ENST00000602755 427 ntBASIC19.42■□□□□ 0.7
NME8Q8N427 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NME8Q8N427 MIR1199-201ENST00000621445 119 ntBASIC19.42■□□□□ 0.7
NME8Q8N427 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 AC004817.3-201ENST00000602957 2129 ntBASIC19.42■□□□□ 0.7
NME8Q8N427 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NME8Q8N427 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
NME8Q8N427 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.41■□□□□ 0.7
NME8Q8N427 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NME8Q8N427 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.41■□□□□ 0.7
NME8Q8N427 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NME8Q8N427 PGAM5P1-201ENST00000518923 814 ntBASIC19.41■□□□□ 0.7
NME8Q8N427 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NME8Q8N427 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.41■□□□□ 0.7
NME8Q8N427 AC140113.2-201ENST00000604370 208 ntBASIC19.41■□□□□ 0.7
NME8Q8N427 AC139530.3-201ENST00000620344 690 ntBASIC19.41■□□□□ 0.7
NME8Q8N427 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.41■□□□□ 0.7
NME8Q8N427 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
NME8Q8N427 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 AL138781.2-201ENST00000617896 1843 ntBASIC19.41■□□□□ 0.7
NME8Q8N427 AC132938.5-201ENST00000624980 1813 ntBASIC19.41■□□□□ 0.7
NME8Q8N427 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.41■□□□□ 0.7
NME8Q8N427 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.41■□□□□ 0.7
NME8Q8N427 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NME8Q8N427 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NME8Q8N427 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.41■□□□□ 0.7
NME8Q8N427 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.4■□□□□ 0.7
NME8Q8N427 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.4■□□□□ 0.7
NME8Q8N427 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 AC003669.1-201ENST00000334569 611 ntBASIC19.4■□□□□ 0.7
NME8Q8N427 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.4■□□□□ 0.7
NME8Q8N427 AC073621.1-201ENST00000392730 636 ntBASIC19.4■□□□□ 0.7
NME8Q8N427 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.4■□□□□ 0.7
NME8Q8N427 MED15P5-201ENST00000423150 992 ntBASIC19.4■□□□□ 0.7
NME8Q8N427 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NME8Q8N427 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.4■□□□□ 0.7
NME8Q8N427 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.4■□□□□ 0.7
NME8Q8N427 AC005593.1-201ENST00000624894 515 ntBASIC19.4■□□□□ 0.7
NME8Q8N427 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.4■□□□□ 0.7
NME8Q8N427 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.4■□□□□ 0.7
NME8Q8N427 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.4■□□□□ 0.7
NME8Q8N427 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.4■□□□□ 0.7
NME8Q8N427 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NME8Q8N427 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.39■□□□□ 0.7
NME8Q8N427 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NME8Q8N427 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NME8Q8N427 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.39■□□□□ 0.69
NME8Q8N427 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.39■□□□□ 0.69
NME8Q8N427 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.39■□□□□ 0.69
NME8Q8N427 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 SIGLEC30P-201ENST00000455569 941 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms