Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.48■■□□□ 1.99
VPS8Q8N3P4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC27.48■■□□□ 1.99
VPS8Q8N3P4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
VPS8Q8N3P4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC27.48■■□□□ 1.99
VPS8Q8N3P4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 AC134043.2-201ENST00000624206 2238 ntBASIC27.47■■□□□ 1.99
VPS8Q8N3P4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 AC136632.2-201ENST00000512891 861 ntBASIC27.47■■□□□ 1.99
VPS8Q8N3P4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 AL805961.1-202ENST00000641562 540 ntBASIC27.47■■□□□ 1.99
VPS8Q8N3P4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
VPS8Q8N3P4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 AC007613.1-201ENST00000572811 2597 ntBASIC27.46■■□□□ 1.99
VPS8Q8N3P4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 AC093909.1-201ENST00000504731 1122 ntBASIC27.46■■□□□ 1.99
VPS8Q8N3P4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC27.46■■□□□ 1.99
VPS8Q8N3P4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
VPS8Q8N3P4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
VPS8Q8N3P4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
VPS8Q8N3P4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 RPS2P28-201ENST00000314255 741 ntBASIC27.45■■□□□ 1.98
VPS8Q8N3P4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 LINC00982-205ENST00000420957 435 ntBASIC27.45■■□□□ 1.98
VPS8Q8N3P4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 AC034105.1-201ENST00000563488 319 ntBASIC27.45■■□□□ 1.98
VPS8Q8N3P4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC27.45■■□□□ 1.98
VPS8Q8N3P4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 GPR89P-201ENST00000407924 1495 ntBASIC27.44■■□□□ 1.98
VPS8Q8N3P4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS8Q8N3P4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
VPS8Q8N3P4 AC097637.2-201ENST00000624096 1997 ntBASIC27.43■■□□□ 1.98
VPS8Q8N3P4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC27.42■■□□□ 1.98
VPS8Q8N3P4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms