Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.35■■□□□ 1.17
PROM2Q8N271 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PROM2Q8N271 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PROM2Q8N271 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
PROM2Q8N271 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.35■■□□□ 1.17
PROM2Q8N271 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 AC009336.1-201ENST00000608941 1553 ntBASIC22.35■■□□□ 1.17
PROM2Q8N271 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PROM2Q8N271 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.35■■□□□ 1.17
PROM2Q8N271 RBPMS2P1-201ENST00000437762 623 ntBASIC22.35■■□□□ 1.17
PROM2Q8N271 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PROM2Q8N271 SERBP1P5-201ENST00000510079 1181 ntBASIC22.35■■□□□ 1.17
PROM2Q8N271 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PROM2Q8N271 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.35■■□□□ 1.17
PROM2Q8N271 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PROM2Q8N271 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC22.35■■□□□ 1.17
PROM2Q8N271 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PROM2Q8N271 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.35■■□□□ 1.17
PROM2Q8N271 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC22.35■■□□□ 1.17
PROM2Q8N271 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PROM2Q8N271 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PROM2Q8N271 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.34■■□□□ 1.17
PROM2Q8N271 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22.34■■□□□ 1.17
PROM2Q8N271 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
PROM2Q8N271 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.34■■□□□ 1.17
PROM2Q8N271 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PROM2Q8N271 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.34■■□□□ 1.17
PROM2Q8N271 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.34■■□□□ 1.17
PROM2Q8N271 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.34■■□□□ 1.17
PROM2Q8N271 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.34■■□□□ 1.17
PROM2Q8N271 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.34■■□□□ 1.17
PROM2Q8N271 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC22.34■■□□□ 1.17
PROM2Q8N271 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC22.34■■□□□ 1.17
PROM2Q8N271 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC22.34■■□□□ 1.17
PROM2Q8N271 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC22.34■■□□□ 1.17
PROM2Q8N271 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.34■■□□□ 1.17
PROM2Q8N271 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 AC093010.1-201ENST00000473625 1624 ntBASIC22.34■■□□□ 1.17
PROM2Q8N271 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PROM2Q8N271 AC100803.2-201ENST00000562459 1963 ntBASIC22.34■■□□□ 1.17
PROM2Q8N271 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PROM2Q8N271 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
PROM2Q8N271 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.33■■□□□ 1.17
PROM2Q8N271 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.33■■□□□ 1.17
PROM2Q8N271 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PROM2Q8N271 MRPS18AP1-201ENST00000414458 589 ntBASIC22.33■■□□□ 1.17
PROM2Q8N271 ARSEP1-201ENST00000420443 635 ntBASIC22.33■■□□□ 1.17
PROM2Q8N271 AC140658.5-201ENST00000438532 169 ntBASIC22.33■■□□□ 1.17
PROM2Q8N271 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC22.33■■□□□ 1.17
PROM2Q8N271 NAA50-208ENST00000497255 789 ntTSL 5 BASIC22.33■■□□□ 1.17
PROM2Q8N271 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.33■■□□□ 1.17
PROM2Q8N271 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.33■■□□□ 1.17
PROM2Q8N271 COQ6-210ENST00000554920 649 ntTSL 3 BASIC22.33■■□□□ 1.17
PROM2Q8N271 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.33■■□□□ 1.17
PROM2Q8N271 LINC01225-203ENST00000563550 1244 ntBASIC22.33■■□□□ 1.17
PROM2Q8N271 AC026150.2-201ENST00000564693 1156 ntBASIC22.33■■□□□ 1.17
PROM2Q8N271 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.33■■□□□ 1.17
PROM2Q8N271 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PROM2Q8N271 AL358472.5-202ENST00000641448 1267 ntBASIC22.33■■□□□ 1.17
PROM2Q8N271 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PROM2Q8N271 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
PROM2Q8N271 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
PROM2Q8N271 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PROM2Q8N271 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.32■■□□□ 1.16
PROM2Q8N271 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PROM2Q8N271 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PROM2Q8N271 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PROM2Q8N271 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.32■■□□□ 1.16
PROM2Q8N271 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PROM2Q8N271 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PROM2Q8N271 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.32■■□□□ 1.16
PROM2Q8N271 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms