Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 ABHD17AP4-201ENST00000411545 909 ntBASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 AL031848.2-201ENST00000607670 837 ntBASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 AL355001.2-201ENST00000620617 1191 ntBASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 MTHFR-217ENST00000641820 1569 ntBASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 AC015656.1-201ENST00000624209 3578 ntBASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST3H2BBQ8N257 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST3H2BBQ8N257 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST3H2BBQ8N257 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
HIST3H2BBQ8N257 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC016396.2-201ENST00000562575 1417 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC046185.3-201ENST00000623228 1824 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms