Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 AC016734.2-201ENST00000624325 1377 ntBASIC17.08■□□□□ 0.32
KRT78Q8N1N4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 TSSC2-201ENST00000450217 709 ntBASIC17.08■□□□□ 0.32
KRT78Q8N1N4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 AL445228.2-201ENST00000605589 952 ntBASIC17.08■□□□□ 0.32
KRT78Q8N1N4 AC091076.1-201ENST00000610741 619 ntBASIC17.08■□□□□ 0.32
KRT78Q8N1N4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
KRT78Q8N1N4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AC246785.2-201ENST00000432512 513 ntBASIC17.07■□□□□ 0.32
KRT78Q8N1N4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 LINC00896-202ENST00000609602 2128 ntBASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AL353801.3-201ENST00000609898 542 ntBASIC17.07■□□□□ 0.32
KRT78Q8N1N4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AC133963.1-201ENST00000504166 1679 ntBASIC17.07■□□□□ 0.32
KRT78Q8N1N4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT78Q8N1N4 AL355312.1-201ENST00000407115 2176 ntBASIC17.06■□□□□ 0.32
KRT78Q8N1N4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 KRT18P1-202ENST00000452408 1331 ntBASIC17.06■□□□□ 0.32
KRT78Q8N1N4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT78Q8N1N4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms