Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC011498.5-201ENST00000592027 486 ntBASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 AL121956.5-201ENST00000625261 221 ntBASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE9Q8IYJ1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE9Q8IYJ1 AC005332.1-201ENST00000577698 1310 ntBASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 GUSBP12-201ENST00000513727 720 ntBASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 AL592071.1-201ENST00000611956 408 ntBASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 AC141586.5-201ENST00000624546 2050 ntBASIC17.48■□□□□ 0.39
CPNE9Q8IYJ1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE9Q8IYJ1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE9Q8IYJ1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE9Q8IYJ1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.47■□□□□ 0.39
CPNE9Q8IYJ1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms