Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.58■□□□□ 0.57
SCUBE3Q8IX30 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 AC114341.1-201ENST00000618070 349 ntBASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 AC012183.1-201ENST00000625197 499 ntBASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCUBE3Q8IX30 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 LINC00304-203ENST00000565008 1864 ntBASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 KRT16P4-201ENST00000453883 522 ntBASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 LINC00896-202ENST00000609602 2128 ntBASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCUBE3Q8IX30 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 TSPY19P-201ENST00000418461 509 ntBASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 TSPY18P-201ENST00000441642 509 ntBASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 AC122714.2-201ENST00000502787 707 ntBASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCUBE3Q8IX30 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AC090340.1-201ENST00000620778 4980 ntBASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms