Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 AP002472.1-201ENST00000577490 586 ntBASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 LINC02084-201ENST00000606069 1096 ntBASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.83■□□□□ 0.6
NPAS4Q8IUM7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AL031432.2-201ENST00000566714 459 ntBASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AL928711.1-201ENST00000570165 459 ntBASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AC007064.4-201ENST00000637740 555 ntBASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 AC025580.3-201ENST00000617932 1424 ntBASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NPAS4Q8IUM7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 ACTG1P4-201ENST00000425123 1122 ntBASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 FAM58CP-201ENST00000435741 640 ntBASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 ACTG1P14-201ENST00000446382 1122 ntBASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AC074386.1-202ENST00000463561 864 ntBASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AC023141.13-201ENST00000604991 943 ntBASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS4Q8IUM7 AL020996.1-203ENST00000536896 2307 ntBASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 AL645939.2-201ENST00000427340 991 ntBASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms