Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 LETM1P2-201ENST00000597330 2178 ntBASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 LINC00304-203ENST00000565008 1864 ntBASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP4Q86YS3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 VENTXP7-201ENST00000475503 772 ntBASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 AC104819.1-201ENST00000504587 486 ntBASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 AC116407.2-201ENST00000613639 860 ntBASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP4Q86YS3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 NUS1P2-201ENST00000417358 873 ntBASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 AC096633.1-201ENST00000422446 749 ntBASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 AC246785.2-201ENST00000432512 513 ntBASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB11FIP4Q86YS3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
RAB11FIP4Q86YS3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms