Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MIR6752-201ENST00000618442 71 ntBASIC12.19□□□□□ -0.46
CSMD3Q7Z407 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AL096828.2-201ENST00000567259 1965 ntBASIC12.18□□□□□ -0.46
CSMD3Q7Z407 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AC116562.4-201ENST00000641316 2276 ntBASIC12.18□□□□□ -0.46
CSMD3Q7Z407 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 TIMM8BP1-201ENST00000452384 211 ntBASIC12.18□□□□□ -0.46
CSMD3Q7Z407 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AL353135.1-201ENST00000606729 504 ntBASIC12.18□□□□□ -0.46
CSMD3Q7Z407 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD3Q7Z407 STK25P1-201ENST00000585406 838 ntBASIC12.18□□□□□ -0.46
CSMD3Q7Z407 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AC008677.1-201ENST00000519230 1561 ntBASIC12.17□□□□□ -0.46
CSMD3Q7Z407 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AP001059.3-201ENST00000619053 235 ntBASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD3Q7Z407 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms