Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 SNORA78-201ENST00000459373 127 ntBASIC16■□□□□ 0.15
SHFQ7M4L6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 AL355075.4-201ENST00000554988 638 ntBASIC16■□□□□ 0.15
SHFQ7M4L6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 TMEM191A-211ENST00000637163 1067 ntBASIC16■□□□□ 0.15
SHFQ7M4L6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 AC009949.1-201ENST00000623048 1830 ntBASIC16■□□□□ 0.15
SHFQ7M4L6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 SEC1P-202ENST00000473944 940 ntBASIC15.99■□□□□ 0.15
SHFQ7M4L6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 NAPSB-206ENST00000562112 1266 ntBASIC15.99■□□□□ 0.15
SHFQ7M4L6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 REXO1L11P-201ENST00000620964 1927 ntBASIC15.99■□□□□ 0.15
SHFQ7M4L6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHFQ7M4L6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.99■□□□□ 0.15
SHFQ7M4L6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 AC079328.2-201ENST00000561241 3354 ntBASIC15.98■□□□□ 0.15
SHFQ7M4L6 NEK4P2-201ENST00000580004 1012 ntBASIC15.98■□□□□ 0.15
SHFQ7M4L6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 AC092865.7-201ENST00000641832 219 ntBASIC15.98■□□□□ 0.15
SHFQ7M4L6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms