Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.72■□□□□ 0.43
USP45Q70EL2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.72■□□□□ 0.43
USP45Q70EL2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.72■□□□□ 0.43
USP45Q70EL2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.72■□□□□ 0.43
USP45Q70EL2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.72■□□□□ 0.43
USP45Q70EL2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP45Q70EL2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.72■□□□□ 0.43
USP45Q70EL2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP45Q70EL2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.72■□□□□ 0.43
USP45Q70EL2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP45Q70EL2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP45Q70EL2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.71■□□□□ 0.43
USP45Q70EL2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP45Q70EL2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.71■□□□□ 0.43
USP45Q70EL2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP45Q70EL2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP45Q70EL2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.71■□□□□ 0.43
USP45Q70EL2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP45Q70EL2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP45Q70EL2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 AC132008.2-207ENST00000454517 770 ntBASIC17.71■□□□□ 0.43
USP45Q70EL2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.71■□□□□ 0.43
USP45Q70EL2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.71■□□□□ 0.43
USP45Q70EL2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP45Q70EL2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 PKD1P1-201ENST00000458669 6805 ntBASIC17.71■□□□□ 0.43
USP45Q70EL2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.71■□□□□ 0.43
USP45Q70EL2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.71■□□□□ 0.43
USP45Q70EL2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.71■□□□□ 0.42
USP45Q70EL2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.71■□□□□ 0.42
USP45Q70EL2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP45Q70EL2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.71■□□□□ 0.42
USP45Q70EL2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.7■□□□□ 0.42
USP45Q70EL2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 AC004870.1-201ENST00000315132 882 ntBASIC17.7■□□□□ 0.42
USP45Q70EL2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.7■□□□□ 0.42
USP45Q70EL2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.7■□□□□ 0.42
USP45Q70EL2 UNC93B7-201ENST00000509439 705 ntBASIC17.7■□□□□ 0.42
USP45Q70EL2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
USP45Q70EL2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.7■□□□□ 0.42
USP45Q70EL2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.7■□□□□ 0.42
USP45Q70EL2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.7■□□□□ 0.42
USP45Q70EL2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.7■□□□□ 0.42
USP45Q70EL2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 REXO1L6P-202ENST00000619970 1078 ntBASIC17.7■□□□□ 0.42
USP45Q70EL2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.7■□□□□ 0.42
USP45Q70EL2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP45Q70EL2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP45Q70EL2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.7■□□□□ 0.42
USP45Q70EL2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP45Q70EL2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP45Q70EL2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP45Q70EL2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP45Q70EL2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP45Q70EL2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP45Q70EL2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms