Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 MIR574-201ENST00000385209 96 ntBASIC14.51□□□□□ -0.09
TREML4Q6UXN2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AL603841.1-201ENST00000430516 664 ntBASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 EIF2S2P5-201ENST00000457635 968 ntBASIC14.51□□□□□ -0.09
TREML4Q6UXN2 TOB2P1-201ENST00000469761 992 ntBASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AC104819.1-201ENST00000504587 486 ntBASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 AC080080.1-201ENST00000625121 2420 ntBASIC14.5□□□□□ -0.09
TREML4Q6UXN2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 MIR3908-201ENST00000579798 126 ntBASIC14.5□□□□□ -0.09
TREML4Q6UXN2 MIR4674-201ENST00000582457 87 ntBASIC14.5□□□□□ -0.09
TREML4Q6UXN2 AC064862.7-201ENST00000604520 867 ntBASIC14.5□□□□□ -0.09
TREML4Q6UXN2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 AC024243.1-201ENST00000609234 778 ntBASIC14.5□□□□□ -0.09
TREML4Q6UXN2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 PP12613-201ENST00000424958 2230 ntBASIC14.5□□□□□ -0.09
TREML4Q6UXN2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREML4Q6UXN2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 AC006116.8-202ENST00000587620 1550 ntBASIC14.49□□□□□ -0.09
TREML4Q6UXN2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 KRT16P4-201ENST00000453883 522 ntBASIC14.49□□□□□ -0.09
TREML4Q6UXN2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TREML4Q6UXN2 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms