Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 UBALD1-205ENST00000590891 2641 ntBASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 TSPY17P-201ENST00000450329 467 ntBASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 CROCCP2-202ENST00000412962 2773 ntBASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPP4R4Q6NUP7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AC113347.1-201ENST00000413321 391 ntBASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 RN7SL850P-201ENST00000579959 291 ntBASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AL391005.1-201ENST00000623953 2435 ntBASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPP4R4Q6NUP7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 RCC2P3-201ENST00000418112 1537 ntBASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TMPOP1-202ENST00000424642 1267 ntBASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 AC007663.1-201ENST00000438948 1240 ntBASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 AP003041.3-201ENST00000527151 707 ntBASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPP4R4Q6NUP7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms