Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 ATP5G2P4-201ENST00000442175 420 ntBASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCRAQ6ISU1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 RN7SL692P-201ENST00000464677 288 ntBASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 AC243562.1-201ENST00000560672 389 ntBASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 AL662799.1-202ENST00000614205 422 ntBASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCRAQ6ISU1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 AC009336.1-201ENST00000608941 1553 ntBASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 AL158211.3-201ENST00000607385 239 ntBASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 ESPNP-201ENST00000270691 2015 ntBASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCRAQ6ISU1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 AC008677.1-201ENST00000519230 1561 ntBASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms