Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 TSPY19P-201ENST00000418461 509 ntBASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 TSPY18P-201ENST00000441642 509 ntBASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 MIR5100-201ENST00000579544 119 ntBASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PPP4R3AQ6IN85 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PPP4R3AQ6IN85 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 LINC01451-201ENST00000623792 534 ntBASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP4R3AQ6IN85 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 AC103564.2-201ENST00000432853 1299 ntBASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 PRELID1P1-202ENST00000567272 903 ntBASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 AC138894.3-201ENST00000603787 634 ntBASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 AL121772.3-201ENST00000610840 674 ntBASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP4R3AQ6IN85 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 LINC00304-203ENST00000565008 1864 ntBASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 LTB4R2-202ENST00000528054 3092 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms