Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCP2Q5VXM1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 DDX43P3-201ENST00000441064 443 ntBASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 SPCS2P1-201ENST00000561636 679 ntBASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 AC091812.2-201ENST00000619081 385 ntBASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 AL513210.1-201ENST00000629608 234 ntBASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 AC092902.6-201ENST00000641783 218 ntBASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCP2Q5VXM1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCP2Q5VXM1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDCP2Q5VXM1 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.66■□□□□ 0.26
CDCP2Q5VXM1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDCP2Q5VXM1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms