Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 KRT18P65-201ENST00000439811 1286 ntBASIC17.84■□□□□ 0.45
LGSNQ5TDP6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 NEK4P2-201ENST00000580004 1012 ntBASIC17.84■□□□□ 0.45
LGSNQ5TDP6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGSNQ5TDP6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGSNQ5TDP6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 MIR718-201ENST00000390190 70 ntBASIC17.83■□□□□ 0.44
LGSNQ5TDP6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 MIR1238-201ENST00000408483 83 ntBASIC17.83■□□□□ 0.44
LGSNQ5TDP6 AC009947.2-201ENST00000444014 672 ntBASIC17.83■□□□□ 0.44
LGSNQ5TDP6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 Z99916.2-201ENST00000604037 246 ntBASIC17.83■□□□□ 0.44
LGSNQ5TDP6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LGSNQ5TDP6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGSNQ5TDP6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms