Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 GGTLC5P-201ENST00000617623 998 ntBASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 BCAR1-209ENST00000546196 1340 ntBASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.16■□□□□ 0.66
TRIM71Q2Q1W2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 AC027612.4-201ENST00000605371 583 ntBASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM71Q2Q1W2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM71Q2Q1W2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM71Q2Q1W2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM71Q2Q1W2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
TRIM71Q2Q1W2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
TRIM71Q2Q1W2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 AC025580.3-201ENST00000617932 1424 ntBASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM71Q2Q1W2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms