Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL1Q00532 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDKL1Q00532 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL1Q00532 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL1Q00532 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDKL1Q00532 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 AC068472.1-201ENST00000474589 881 ntBASIC17.41■□□□□ 0.38
CDKL1Q00532 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDKL1Q00532 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDKL1Q00532 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDKL1Q00532 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL1Q00532 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL1Q00532 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDKL1Q00532 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CDKL1Q00532 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL1Q00532 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CDKL1Q00532 MTCL1P1-201ENST00000446207 792 ntBASIC17.4■□□□□ 0.38
CDKL1Q00532 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.4■□□□□ 0.38
CDKL1Q00532 RNF126P1-202ENST00000569893 925 ntBASIC17.4■□□□□ 0.38
CDKL1Q00532 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.4■□□□□ 0.38
CDKL1Q00532 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 AC046158.3-201ENST00000624947 2558 ntBASIC17.4■□□□□ 0.38
CDKL1Q00532 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL1Q00532 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL1Q00532 AC009949.1-201ENST00000623048 1830 ntBASIC17.4■□□□□ 0.38
CDKL1Q00532 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDKL1Q00532 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL1Q00532 Z83836.1-201ENST00000624605 1642 ntBASIC17.39■□□□□ 0.38
CDKL1Q00532 HTR7P1-202ENST00000624664 4411 ntBASIC17.39■□□□□ 0.38
CDKL1Q00532 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDKL1Q00532 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDKL1Q00532 AC133963.1-201ENST00000504166 1679 ntBASIC17.39■□□□□ 0.37
CDKL1Q00532 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDKL1Q00532 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL1Q00532 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 AL645929.1-201ENST00000420084 975 ntBASIC17.39■□□□□ 0.37
CDKL1Q00532 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.39■□□□□ 0.37
CDKL1Q00532 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL1Q00532 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.39■□□□□ 0.37
CDKL1Q00532 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDKL1Q00532 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDKL1Q00532 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.39■□□□□ 0.37
CDKL1Q00532 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL1Q00532 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL1Q00532 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CDKL1Q00532 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDKL1Q00532 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL1Q00532 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms