Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.62■□□□□ 0.57
HTRA4P83105 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.62■□□□□ 0.57
HTRA4P83105 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.62■□□□□ 0.57
HTRA4P83105 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.62■□□□□ 0.57
HTRA4P83105 AJ011932.1-201ENST00000621707 465 ntBASIC18.62■□□□□ 0.57
HTRA4P83105 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HTRA4P83105 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HTRA4P83105 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 AC093677.2-201ENST00000600169 1863 ntBASIC18.62■□□□□ 0.57
HTRA4P83105 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HTRA4P83105 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HTRA4P83105 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTRA4P83105 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
HTRA4P83105 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.61■□□□□ 0.57
HTRA4P83105 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.61■□□□□ 0.57
HTRA4P83105 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 AC002056.1-201ENST00000395613 760 ntBASIC18.61■□□□□ 0.57
HTRA4P83105 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.61■□□□□ 0.57
HTRA4P83105 AC067863.1-201ENST00000494933 530 ntBASIC18.61■□□□□ 0.57
HTRA4P83105 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.61■□□□□ 0.57
HTRA4P83105 AC026120.1-201ENST00000611536 926 ntBASIC18.61■□□□□ 0.57
HTRA4P83105 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.61■□□□□ 0.57
HTRA4P83105 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HTRA4P83105 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTRA4P83105 CROCCP3-202ENST00000420820 1947 ntBASIC18.61■□□□□ 0.57
HTRA4P83105 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HTRA4P83105 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HTRA4P83105 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTRA4P83105 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 AL355306.1-201ENST00000415580 579 ntBASIC18.6■□□□□ 0.57
HTRA4P83105 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.6■□□□□ 0.57
HTRA4P83105 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.6■□□□□ 0.57
HTRA4P83105 RNA5SP421-201ENST00000516864 134 ntBASIC18.6■□□□□ 0.57
HTRA4P83105 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.6■□□□□ 0.57
HTRA4P83105 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.6■□□□□ 0.57
HTRA4P83105 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.6■□□□□ 0.57
HTRA4P83105 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 Z92544.3-201ENST00000624747 417 ntBASIC18.6■□□□□ 0.57
HTRA4P83105 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.6■□□□□ 0.57
HTRA4P83105 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA4P83105 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA4P83105 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA4P83105 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA4P83105 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.59■□□□□ 0.57
HTRA4P83105 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.59■□□□□ 0.57
HTRA4P83105 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA4P83105 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA4P83105 TIMM8BP1-201ENST00000452384 211 ntBASIC18.59■□□□□ 0.57
HTRA4P83105 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.59■□□□□ 0.57
HTRA4P83105 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA4P83105 DUX4L27-201ENST00000554796 1261 ntBASIC18.59■□□□□ 0.57
HTRA4P83105 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA4P83105 AC099522.2-201ENST00000607001 744 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms