Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
SRPXP78539 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SRPXP78539 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.58□□□□□ -0.07
SRPXP78539 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SRPXP78539 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
SRPXP78539 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SRPXP78539 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SRPXP78539 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 AC009949.1-201ENST00000623048 1830 ntBASIC14.58□□□□□ -0.08
SRPXP78539 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.58□□□□□ -0.08
SRPXP78539 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 ESRRAP1-201ENST00000400596 1257 ntBASIC14.58□□□□□ -0.08
SRPXP78539 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SRPXP78539 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
SRPXP78539 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SRPXP78539 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.58□□□□□ -0.08
SRPXP78539 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.58□□□□□ -0.08
SRPXP78539 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.58□□□□□ -0.08
SRPXP78539 AC010240.3-201ENST00000607688 395 ntBASIC14.58□□□□□ -0.08
SRPXP78539 CR769767.2-201ENST00000622735 460 ntBASIC14.58□□□□□ -0.08
SRPXP78539 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 REXO1L11P-201ENST00000620964 1927 ntBASIC14.58□□□□□ -0.08
SRPXP78539 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.58□□□□□ -0.08
SRPXP78539 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SRPXP78539 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRPXP78539 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SRPXP78539 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SRPXP78539 AL355355.2-201ENST00000442321 338 ntBASIC14.57□□□□□ -0.08
SRPXP78539 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.57□□□□□ -0.08
SRPXP78539 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.57□□□□□ -0.08
SRPXP78539 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
SRPXP78539 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.57□□□□□ -0.08
SRPXP78539 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SRPXP78539 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
SRPXP78539 AC105020.1-201ENST00000435356 2205 ntBASIC14.57□□□□□ -0.08
SRPXP78539 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 AC068587.6-202ENST00000641839 5619 ntBASIC14.57□□□□□ -0.08
SRPXP78539 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRPXP78539 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.57□□□□□ -0.08
SRPXP78539 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRPXP78539 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.56□□□□□ -0.08
SRPXP78539 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SRPXP78539 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.56□□□□□ -0.08
SRPXP78539 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRPXP78539 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRPXP78539 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRPXP78539 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.56□□□□□ -0.08
SRPXP78539 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRPXP78539 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms