Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.75■□□□□ 0.27
RAE1P78406 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.75■□□□□ 0.27
RAE1P78406 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.75■□□□□ 0.27
RAE1P78406 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAE1P78406 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.75■□□□□ 0.27
RAE1P78406 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.75■□□□□ 0.27
RAE1P78406 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.75■□□□□ 0.27
RAE1P78406 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAE1P78406 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAE1P78406 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.75■□□□□ 0.27
RAE1P78406 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAE1P78406 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
RAE1P78406 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAE1P78406 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.75■□□□□ 0.27
RAE1P78406 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.75■□□□□ 0.27
RAE1P78406 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RAE1P78406 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.74■□□□□ 0.27
RAE1P78406 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.74■□□□□ 0.27
RAE1P78406 AC016396.2-201ENST00000562575 1417 ntBASIC16.74■□□□□ 0.27
RAE1P78406 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.74■□□□□ 0.27
RAE1P78406 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.74■□□□□ 0.27
RAE1P78406 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RAE1P78406 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 AC011840.4-201ENST00000578471 627 ntBASIC16.74■□□□□ 0.27
RAE1P78406 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.74■□□□□ 0.27
RAE1P78406 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 AC116407.4-201ENST00000623319 1061 ntBASIC16.74■□□□□ 0.27
RAE1P78406 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.74■□□□□ 0.27
RAE1P78406 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAE1P78406 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAE1P78406 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAE1P78406 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAE1P78406 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RAE1P78406 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.73■□□□□ 0.27
RAE1P78406 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RAE1P78406 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.73■□□□□ 0.27
RAE1P78406 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.73■□□□□ 0.27
RAE1P78406 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.73■□□□□ 0.27
RAE1P78406 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.73■□□□□ 0.27
RAE1P78406 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.73■□□□□ 0.27
RAE1P78406 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.73■□□□□ 0.27
RAE1P78406 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.73■□□□□ 0.27
RAE1P78406 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 AP005901.3-202ENST00000581653 237 ntBASIC16.73■□□□□ 0.27
RAE1P78406 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RAE1P78406 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.73■□□□□ 0.27
RAE1P78406 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.73■□□□□ 0.27
RAE1P78406 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAE1P78406 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.73■□□□□ 0.27
RAE1P78406 AC009053.2-201ENST00000563701 2365 ntBASIC16.73■□□□□ 0.27
RAE1P78406 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAE1P78406 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAE1P78406 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
RAE1P78406 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.73■□□□□ 0.27
RAE1P78406 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAE1P78406 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms