Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.42□□□□□ -0.1
SPCS3P61009 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.42□□□□□ -0.1
SPCS3P61009 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.42□□□□□ -0.1
SPCS3P61009 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.42□□□□□ -0.1
SPCS3P61009 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.42□□□□□ -0.1
SPCS3P61009 AC026471.5-201ENST00000615068 467 ntBASIC14.42□□□□□ -0.1
SPCS3P61009 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.42□□□□□ -0.1
SPCS3P61009 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.42□□□□□ -0.1
SPCS3P61009 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 AC092338.2-201ENST00000568827 1415 ntBASIC14.41□□□□□ -0.1
SPCS3P61009 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 AC005052.1-201ENST00000625181 2492 ntBASIC14.41□□□□□ -0.1
SPCS3P61009 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SPCS3P61009 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 AC142381.4-202ENST00000563973 229 ntBASIC14.41□□□□□ -0.1
SPCS3P61009 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.41□□□□□ -0.1
SPCS3P61009 AC116562.4-202ENST00000641738 218 ntBASIC14.41□□□□□ -0.1
SPCS3P61009 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SPCS3P61009 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
SPCS3P61009 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 AC100803.2-201ENST00000562459 1963 ntBASIC14.41□□□□□ -0.1
SPCS3P61009 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 AL121761.2-201ENST00000598007 1648 ntBASIC14.41□□□□□ -0.1
SPCS3P61009 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPCS3P61009 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.41□□□□□ -0.1
SPCS3P61009 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS3P61009 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.4□□□□□ -0.1
SPCS3P61009 UNC93B2-201ENST00000285383 730 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms