Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDH13P55290 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDH13P55290 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDH13P55290 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH13P55290 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH13P55290 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH13P55290 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 AC113347.1-201ENST00000413321 391 ntBASIC17.3■□□□□ 0.36
CDH13P55290 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH13P55290 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH13P55290 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 AC005363.2-201ENST00000618631 242 ntBASIC17.3■□□□□ 0.36
CDH13P55290 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH13P55290 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH13P55290 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH13P55290 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDH13P55290 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH13P55290 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDH13P55290 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 TERF1P1-201ENST00000311003 1181 ntBASIC17.29■□□□□ 0.36
CDH13P55290 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH13P55290 AC117947.1-201ENST00000427448 529 ntBASIC17.29■□□□□ 0.36
CDH13P55290 BX664615.1-201ENST00000443558 458 ntBASIC17.29■□□□□ 0.36
CDH13P55290 AC112698.1-201ENST00000510299 916 ntBASIC17.29■□□□□ 0.36
CDH13P55290 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH13P55290 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.29■□□□□ 0.36
CDH13P55290 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH13P55290 AC012306.2-201ENST00000609350 630 ntBASIC17.29■□□□□ 0.36
CDH13P55290 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH13P55290 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH13P55290 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 AC084018.2-201ENST00000613093 2607 ntBASIC17.29■□□□□ 0.36
CDH13P55290 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH13P55290 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH13P55290 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 FAM8A6P-201ENST00000407496 1135 ntBASIC17.28■□□□□ 0.36
CDH13P55290 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH13P55290 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH13P55290 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH13P55290 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH13P55290 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH13P55290 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH13P55290 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH13P55290 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH13P55290 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH13P55290 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH13P55290 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms