Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.29■□□□□ 0.04
EFNB2P52799 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.29■□□□□ 0.04
EFNB2P52799 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
EFNB2P52799 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.29■□□□□ 0.04
EFNB2P52799 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.29■□□□□ 0.04
EFNB2P52799 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.29■□□□□ 0.04
EFNB2P52799 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.29■□□□□ 0.04
EFNB2P52799 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.29■□□□□ 0.04
EFNB2P52799 AC010240.3-201ENST00000607688 395 ntBASIC15.29■□□□□ 0.04
EFNB2P52799 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EFNB2P52799 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
EFNB2P52799 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.29■□□□□ 0.04
EFNB2P52799 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EFNB2P52799 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EFNB2P52799 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.28■□□□□ 0.04
EFNB2P52799 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 AC128688.1-201ENST00000487626 519 ntBASIC15.28■□□□□ 0.04
EFNB2P52799 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.28■□□□□ 0.04
EFNB2P52799 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 LINC01451-201ENST00000623792 534 ntBASIC15.28■□□□□ 0.04
EFNB2P52799 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EFNB2P52799 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EFNB2P52799 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
EFNB2P52799 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EFNB2P52799 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
EFNB2P52799 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EFNB2P52799 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.27■□□□□ 0.04
EFNB2P52799 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
EFNB2P52799 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.27■□□□□ 0.04
EFNB2P52799 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EFNB2P52799 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.27■□□□□ 0.04
EFNB2P52799 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EFNB2P52799 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EFNB2P52799 ARMC10P1-201ENST00000313754 855 ntBASIC15.27■□□□□ 0.04
EFNB2P52799 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EFNB2P52799 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.27■□□□□ 0.04
EFNB2P52799 LIN28AP1-201ENST00000429574 405 ntBASIC15.27■□□□□ 0.04
EFNB2P52799 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.27■□□□□ 0.04
EFNB2P52799 ECEL1P2-202ENST00000465689 757 ntBASIC15.27■□□□□ 0.04
EFNB2P52799 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.27■□□□□ 0.04
EFNB2P52799 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.27■□□□□ 0.04
EFNB2P52799 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.27■□□□□ 0.04
EFNB2P52799 AC010203.1-204ENST00000548782 407 ntBASIC15.27■□□□□ 0.04
EFNB2P52799 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.27■□□□□ 0.04
EFNB2P52799 AL353719.1-201ENST00000566847 864 ntBASIC15.27■□□□□ 0.04
EFNB2P52799 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms