Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC112777.1-201ENST00000540175 1423 ntBASIC19.36■□□□□ 0.69
CDR1P51861 LINC00602-201ENST00000629776 2065 ntBASIC19.36■□□□□ 0.69
CDR1P51861 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDR1P51861 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 AP000593.1-201ENST00000393668 712 ntBASIC19.36■□□□□ 0.69
CDR1P51861 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.36■□□□□ 0.69
CDR1P51861 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.36■□□□□ 0.69
CDR1P51861 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.36■□□□□ 0.69
CDR1P51861 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.36■□□□□ 0.69
CDR1P51861 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.36■□□□□ 0.69
CDR1P51861 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.36■□□□□ 0.69
CDR1P51861 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.36■□□□□ 0.69
CDR1P51861 MIR3180-4-201ENST00000582223 153 ntBASIC19.36■□□□□ 0.69
CDR1P51861 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDR1P51861 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDR1P51861 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDR1P51861 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
CDR1P51861 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDR1P51861 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.35■□□□□ 0.69
CDR1P51861 FOSL1P1-201ENST00000511041 816 ntBASIC19.35■□□□□ 0.69
CDR1P51861 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.35■□□□□ 0.69
CDR1P51861 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.35■□□□□ 0.69
CDR1P51861 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.35■□□□□ 0.69
CDR1P51861 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.35■□□□□ 0.69
CDR1P51861 AC138894.3-201ENST00000603787 634 ntBASIC19.35■□□□□ 0.69
CDR1P51861 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDR1P51861 ESPNP-201ENST00000270691 2015 ntBASIC19.35■□□□□ 0.69
CDR1P51861 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDR1P51861 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.35■□□□□ 0.69
CDR1P51861 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.34■□□□□ 0.69
CDR1P51861 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.34■□□□□ 0.69
CDR1P51861 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 AP005901.3-202ENST00000581653 237 ntBASIC19.34■□□□□ 0.69
CDR1P51861 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.34■□□□□ 0.69
CDR1P51861 AL592071.1-201ENST00000611956 408 ntBASIC19.34■□□□□ 0.69
CDR1P51861 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.34■□□□□ 0.69
CDR1P51861 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CDR1P51861 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.34■□□□□ 0.69
CDR1P51861 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDR1P51861 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDR1P51861 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR1P51861 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDR1P51861 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.33■□□□□ 0.69
CDR1P51861 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR1P51861 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDR1P51861 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR1P51861 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.33■□□□□ 0.69
CDR1P51861 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR1P51861 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR1P51861 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.33■□□□□ 0.68
CDR1P51861 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.33■□□□□ 0.68
CDR1P51861 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.33■□□□□ 0.68
CDR1P51861 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CDR1P51861 AC074051.2-201ENST00000565115 352 ntBASIC19.33■□□□□ 0.68
CDR1P51861 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.33■□□□□ 0.68
CDR1P51861 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.33■□□□□ 0.68
CDR1P51861 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.33■□□□□ 0.68
CDR1P51861 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms