Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLCN4P51793 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLCN4P51793 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLCN4P51793 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.52■□□□□ 0.55
CLCN4P51793 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CLCN4P51793 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLCN4P51793 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.52■□□□□ 0.55
CLCN4P51793 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.52■□□□□ 0.55
CLCN4P51793 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLCN4P51793 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.51■□□□□ 0.55
CLCN4P51793 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCN4P51793 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCN4P51793 METTL21AP1-201ENST00000438852 635 ntBASIC18.51■□□□□ 0.55
CLCN4P51793 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLCN4P51793 AC109462.3-201ENST00000573934 613 ntBASIC18.51■□□□□ 0.55
CLCN4P51793 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CLCN4P51793 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCN4P51793 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CLCN4P51793 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.51■□□□□ 0.55
CLCN4P51793 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCN4P51793 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.51■□□□□ 0.55
CLCN4P51793 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN4P51793 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.5■□□□□ 0.55
CLCN4P51793 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCN4P51793 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 HTR5BP-201ENST00000430851 1154 ntBASIC18.5■□□□□ 0.55
CLCN4P51793 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLCN4P51793 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCN4P51793 AL805961.1-202ENST00000641562 540 ntBASIC18.5■□□□□ 0.55
CLCN4P51793 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 GPR89P-201ENST00000407924 1495 ntBASIC18.5■□□□□ 0.55
CLCN4P51793 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCN4P51793 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CLCN4P51793 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCN4P51793 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN4P51793 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCN4P51793 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CLCN4P51793 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.49■□□□□ 0.55
CLCN4P51793 IGLL3P-201ENST00000412472 434 ntBASIC18.49■□□□□ 0.55
CLCN4P51793 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.49■□□□□ 0.55
CLCN4P51793 MKNK2P1-201ENST00000437526 628 ntBASIC18.49■□□□□ 0.55
CLCN4P51793 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CLCN4P51793 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.49■□□□□ 0.55
CLCN4P51793 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 STK25P1-201ENST00000585406 838 ntBASIC18.49■□□□□ 0.55
CLCN4P51793 LINC02084-201ENST00000606069 1096 ntBASIC18.49■□□□□ 0.55
CLCN4P51793 AC010654.1-201ENST00000615722 808 ntBASIC18.49■□□□□ 0.55
CLCN4P51793 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN4P51793 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLCN4P51793 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLCN4P51793 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 AC009113.1-201ENST00000570267 2443 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms