Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5CP51148 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 MIR149-201ENST00000384879 89 ntBASIC14.23□□□□□ -0.13
RAB5CP51148 MIR564-202ENST00000385049 94 ntBASIC14.23□□□□□ -0.13
RAB5CP51148 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5CP51148 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RAB5CP51148 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB5CP51148 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5CP51148 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5CP51148 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5CP51148 AC034236.2-201ENST00000606662 1610 ntBASIC14.23□□□□□ -0.13
RAB5CP51148 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RAB5CP51148 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5CP51148 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5CP51148 AC092068.3-201ENST00000587894 2016 ntBASIC14.22□□□□□ -0.13
RAB5CP51148 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB5CP51148 C1QL1P1-201ENST00000568105 661 ntBASIC14.22□□□□□ -0.13
RAB5CP51148 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5CP51148 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB5CP51148 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
RAB5CP51148 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5CP51148 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB5CP51148 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RAB5CP51148 AC105917.1-201ENST00000506637 2539 ntBASIC14.21□□□□□ -0.13
RAB5CP51148 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB5CP51148 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB5CP51148 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms