Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1EP49674 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1EP49674 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1EP49674 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1EP49674 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1EP49674 CEND1P1-201ENST00000451006 455 ntBASIC17.25■□□□□ 0.35
CSNK1EP49674 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1EP49674 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1EP49674 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 AC009949.1-201ENST00000623048 1830 ntBASIC17.25■□□□□ 0.35
CSNK1EP49674 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1EP49674 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1EP49674 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1EP49674 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1EP49674 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1EP49674 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1EP49674 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.25■□□□□ 0.35
CSNK1EP49674 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CSNK1EP49674 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CSNK1EP49674 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1EP49674 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 MRPL20P1-201ENST00000400819 433 ntBASIC17.24■□□□□ 0.35
CSNK1EP49674 PTCHD3P3-201ENST00000403073 906 ntBASIC17.24■□□□□ 0.35
CSNK1EP49674 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 IGLL3P-201ENST00000412472 434 ntBASIC17.24■□□□□ 0.35
CSNK1EP49674 CNN2P11-201ENST00000429351 262 ntBASIC17.24■□□□□ 0.35
CSNK1EP49674 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1EP49674 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.24■□□□□ 0.35
CSNK1EP49674 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1EP49674 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1EP49674 STK25P1-201ENST00000585406 838 ntBASIC17.24■□□□□ 0.35
CSNK1EP49674 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1EP49674 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1EP49674 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1EP49674 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1EP49674 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1EP49674 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC020763.4-201ENST00000623414 4170 ntBASIC17.23■□□□□ 0.35
CSNK1EP49674 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC093677.2-201ENST00000600169 1863 ntBASIC17.23■□□□□ 0.35
CSNK1EP49674 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.23■□□□□ 0.35
CSNK1EP49674 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CSNK1EP49674 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.23■□□□□ 0.35
CSNK1EP49674 IGHV3-52-201ENST00000519770 353 ntBASIC17.23■□□□□ 0.35
CSNK1EP49674 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1EP49674 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC010654.1-201ENST00000615722 808 ntBASIC17.23■□□□□ 0.35
CSNK1EP49674 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 AC004877.2-201ENST00000623941 599 ntBASIC17.23■□□□□ 0.35
CSNK1EP49674 AL805961.1-202ENST00000641562 540 ntBASIC17.23■□□□□ 0.35
CSNK1EP49674 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1EP49674 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1EP49674 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1EP49674 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms